QuickBooks Payments
From Customer Payment to Bank Deposit

Payments in QuickBooks begin when a customer pays an invoice and end when funds reach the bank. Each step must align — otherwise deposits, receivables, and reconciliation drift.

Invoice Paid Clearing Step Bank Settlement

quickbooks payments, how payments work in quickbooks, quickbooks payment problems

how payments work in quickbooks, why payments dont match deposits, what causes payment discrepancies, do payment issues affect reconciliation

How payments work in QuickBooks explained
Workflow • Not Just Cash In

Payments in QuickBooks move through a clearing step before reaching the bank. When payments and deposits don’t align, the issue usually lies in workflow or setup.

How Payments Are Processed

quickbooks payment workflow, invoice payment quickbooks, payment clearing quickbooks

Payments follow a defined sequence. Skipping steps leads to mismatches later.

Customer pays invoice

Invoice Is Paid

The payment closes the customer invoice.

Payment held in clearing account

Payment Clears

Funds are grouped before being deposited.

Deposit recorded to bank

Deposit Reaches Bank

The final deposit posts to the bank account.

Payment Accuracy Depends on Workflow — Not Just Cash Received

In QuickBooks, payments must move cleanly from invoice → clearing → deposit. When any step is skipped or misconfigured, receivables, deposits, and reconciliation fall out of sync.

Payment workflows are evaluated the same way Certified QuickBooks ProAdvisors review live files — by tracing each payment from invoice closure through clearing to final bank posting.

Sequence Matters

Payments must follow the correct order to stay aligned.

Clearing Is Critical

Skipping clearing causes deposit and AR mismatches.

No Auto-Correction

QuickBooks does not fix broken payment flows automatically.

Based on Real Payment Flow Reviews — Not Assumptions

Payment guidance reflects how U.S.-based Certified QuickBooks ProAdvisors review invoice activity, clearing accounts, processor behavior, and deposit alignment inside active QuickBooks files.

quickbooks payment workflow, invoice to deposit quickbooks, payment clearing review

Certified QuickBooks Payment Review

Certified Review

Gold Tier ProAdvisor Payment Expertise

Gold Tier Partner

USA-Based QuickBooks Payments Expertise

U.S.-Based Review

Secure Payment Workflow Evaluation

Objective Analysis

Not Sure Where Your Payment Flow Breaks?

Payment issues are resolved by tracing the workflow — not forcing deposits to match. The next step is identifying where payments fall out of sequence.

quickbooks payment issues, payments not matching deposits, payment workflow review